This evidence includes data generated through high-throughput techniques. Eukaryotic Ortholog Groups More Click "Gene Ontology Details" to view all GO information and evidence for this locus as well as biological processes it shares with other genes. Systems used to automatically annotate proteins with high accuracy:. Genetic Interactions Dosage Lethality: An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction partner is identified by mass spectrometric methods.
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Additional Notes Genetic interactions were considered significant if they had a p-value 0. Select a section on xsf1 left to see content. You are using a version of browser that may not display all the features of this website.
SSF2 - SSF1 Interaction Summary | BioGRID
Saccharomyces Genome Database More EMBL nucleotide sequence database More Primary 13 Additional 25 Reviews 4.
February 1, Last modified: Synthetic Lethality Synthetic Lethality A genetic interaction is inferred when mutations or deletions in separate genes, each of which alone causes a minimal phenotype, result in lethality when combined in the same cell under a given condition.
This term is reserved for high or low throughput studies with scores.
Interaction annotations are curated by BioGRID and include physical or genetic interactions observed between at least two genes. GO Annotations consist of four mandatory components: Genetic interaction profiles enabled assembly of a hierarchical model of cell function, including modules corresponding to Fungal Protein Annotation Program.
Constituent of 66S pre-ribosomal particles; required for ribosomal large subunit maturation; functionally redundant with Ssf2p; member of the Brix family; SSF1 has a paralog, SSF2, that arose from the whole genome duplication. This is version of the entry and version 1 of the sequence. September 18, This ssf1 version of the entry and version 1 sssf1 the sequence.
Select the link destinations: Ensembl fungal genome annotation project More Click "Sequence Details" to view all sequence information for this locus, including that for other strains. Publication A global genetic interaction network maps a wiring diagram of cellular function.
Genetic Interactions Dosage Lethality: SGD Inferred from direct assay i "A nucleolar protein that affects mating efficiency in Saccharomyces cerevisiae by altering the morphological response to pheromone. This evidence includes data generated through high-throughput techniques.
Expression data are derived from records contained in the Gene Expression Omnibus GEOand are first log2 transformed and normalized. Large-scale Survey null cell death: It is useful for tracking sequence updates. An interaction is inferred when a bait protein is affinity captured from cell extracts by either polyclonal antibody or epitope tag and the associated interaction ssv1 is identified by mass spectrometric methods.
An interaction annotation is composed of the interaction type, name of the interactor, assay type e.
Download DNA or protein sequence, view genomic context and coordinates. Strain Alignment Variant Viewer.
Ribosome biogenesis protein SSF1
Ribosome biogenesis protein SSF1. The information is filed in different subsections. Click "Expression Details" to view all expression annotations and details for this locus, including a visualization of genes that share a similar expression pattern. Database of comparative protein structure models More The number of putative Regulators ssf that regulate it and Targets genes it regulates for the given locus, based on experimental evidence.
SGD has manually curated and high-throughput GO Annotations, both derived from the literature, as well as computational, or predicted, annotations.
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